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Commit 1b5e9eb2 authored by Aurélien Lamercerie's avatar Aurélien Lamercerie
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Update CTR to deal with reification concept (2)

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structure/cts/amr_ctr/preprocessing/amr_reification.py
+ 2
− 2
View file @ 1b5e9eb2
...@@ -677,9 +677,9 @@ rule_set['add-amr-edge-for-reified-concept'] = { ...@@ -677,9 +677,9 @@ rule_set['add-amr-edge-for-reified-concept'] = {
# -- New edge (ARG0) # -- New edge (ARG0)
BIND (CONCAT(str(amr:), 'edge') AS ?n01). BIND (CONCAT(str(amr:), 'edge') AS ?n01).
BIND (CONCAT(?n01, '_', ?v1Label) AS ?n02). BIND (CONCAT(?n01, '_', ?rvLabel) AS ?n02).
BIND (CONCAT(?n02, '_', ?roleId0) AS ?n03). BIND (CONCAT(?n02, '_', ?roleId0) AS ?n03).
BIND (CONCAT(?n03, '_', ?rvLabel) AS ?n04). BIND (CONCAT(?n03, '_', ?v1Label) AS ?n04).
BIND (uri(?n04) AS ?newEdge0). BIND (uri(?n04) AS ?newEdge0).
# -- New edge (ARG1) # -- New edge (ARG1)
......
structure/cts/amr_scheme_1.py
+ 1
− 0
View file @ 1b5e9eb2
...@@ -218,6 +218,7 @@ scheme = { ...@@ -218,6 +218,7 @@ scheme = {
amrld_correcting_sequence, amrld_correcting_sequence,
amr_reification_sequence], amr_reification_sequence],
'transduction': [transduction_refinement_sequence, 'transduction': [transduction_refinement_sequence,
atomic_extraction_sequence,
atomic_extraction_sequence, atomic_extraction_sequence,
phenomena_checking_sequence, phenomena_checking_sequence,
composite_property_extraction_sequence, composite_property_extraction_sequence,
......
tenet.log
+ 89
− 84
View file @ 1b5e9eb2
...@@ -23,8 +23,8 @@ ...@@ -23,8 +23,8 @@
----- CTS directory: ./structure/cts/ ----- CTS directory: ./structure/cts/
----- target frame directory: ./input/targetFrameStructure/ ----- target frame directory: ./input/targetFrameStructure/
----- input document directory: ./input/amrDocuments/ ----- input document directory: ./input/amrDocuments/
----- output directory: ./output/SolarSystemDev1-20221209/ ----- output directory: ./output/SolarSystemDev1-20221210/
----- sentence output directory: ./output/SolarSystemDev1-20221209/ ----- sentence output directory: ./output/SolarSystemDev1-20221210/
----- SHACL binary directory: ./lib/shacl-1.3.2/bin ----- SHACL binary directory: ./lib/shacl-1.3.2/bin
-- Config File Definition -- Config File Definition
----- schema file: ./structure/amr-rdf-schema.ttl ----- schema file: ./structure/amr-rdf-schema.ttl
...@@ -44,9 +44,9 @@ ...@@ -44,9 +44,9 @@
----- frame ontology seed file: ./input/targetFrameStructure/base-ontology-seed.ttl ----- frame ontology seed file: ./input/targetFrameStructure/base-ontology-seed.ttl
-- Output -- Output
----- ontology namespace: https://tenet.tetras-libre.fr/base-ontology/ ----- ontology namespace: https://tenet.tetras-libre.fr/base-ontology/
----- output file: ./output/SolarSystemDev1-20221209/SolarSystemDev1.ttl ----- output file: ./output/SolarSystemDev1-20221210/SolarSystemDev1.ttl
*** - *** *** - ***
- INFO - -- Creating output target directory: ./output/SolarSystemDev1-20221209/ - INFO - -- Creating output target directory: ./output/SolarSystemDev1-20221210/
- DEBUG - -- Counting number of graph files (sentences) - DEBUG - -- Counting number of graph files (sentences)
- DEBUG - ----- Graph count: 1 - DEBUG - ----- Graph count: 1
- INFO - === Extraction Processing using New TENET Engine === - INFO - === Extraction Processing using New TENET Engine ===
...@@ -64,9 +64,9 @@ ...@@ -64,9 +64,9 @@
- DEBUG - ----- Sentence Loading - DEBUG - ----- Sentence Loading
- DEBUG - -------- ./input/amrDocuments/dev/solar-system-1/SSC-01-01.stog.amr.ttl (614) - DEBUG - -------- ./input/amrDocuments/dev/solar-system-1/SSC-01-01.stog.amr.ttl (614)
- DEBUG - --- Export work graph as turtle - DEBUG - --- Export work graph as turtle
- DEBUG - ----- Work graph file: ./output/SolarSystemDev1-20221209/SolarSystemDev1-1/SolarSystemDev1.ttl - DEBUG - ----- Work graph file: ./output/SolarSystemDev1-20221210/SolarSystemDev1-1/SolarSystemDev1.ttl
- DEBUG - --- Ending Structure Preparation - DEBUG - --- Ending Structure Preparation
- DEBUG - ----- Total Execution Time = 0:00:00.126792 - DEBUG - ----- Total Execution Time = 0:00:00.120758
- INFO - -- Loading Extraction Scheme (amr_scheme_1) - INFO - -- Loading Extraction Scheme (amr_scheme_1)
- DEBUG - ----- Step number: 3 - DEBUG - ----- Step number: 3
- INFO - -- Loading Extraction Rules (amr_ctr/*) - INFO - -- Loading Extraction Rules (amr_ctr/*)
...@@ -95,7 +95,7 @@ ...@@ -95,7 +95,7 @@
- DEBUG - --- Serializing graph to SolarSystemDev1_preprocessing - DEBUG - --- Serializing graph to SolarSystemDev1_preprocessing
- DEBUG - ----- step: preprocessing - DEBUG - ----- step: preprocessing
- DEBUG - ----- id: SolarSystemDev1 - DEBUG - ----- id: SolarSystemDev1
- DEBUG - ----- work_file: ./output/SolarSystemDev1-20221209/SolarSystemDev1-1/SolarSystemDev1_preprocessing.ttl - DEBUG - ----- work_file: ./output/SolarSystemDev1-20221210/SolarSystemDev1-1/SolarSystemDev1_preprocessing.ttl
- DEBUG - ----- base: http://SolarSystemDev1/preprocessing - DEBUG - ----- base: http://SolarSystemDev1/preprocessing
- INFO - ----- 212 triples extracted during preprocessing step - INFO - ----- 212 triples extracted during preprocessing step
- INFO - -- Applying extraction step: transduction - INFO - -- Applying extraction step: transduction
...@@ -109,114 +109,119 @@ ...@@ -109,114 +109,119 @@
- DEBUG - ----- (refinement) refine-cover-node-1: 6 new triples (939) - DEBUG - ----- (refinement) refine-cover-node-1: 6 new triples (939)
- INFO - ----- create-phenomena-net-1: 24/25 new triples (963) - INFO - ----- create-phenomena-net-1: 24/25 new triples (963)
- DEBUG - ----- (refinement) refine-cover-node-1: 2 new triples (965) - DEBUG - ----- (refinement) refine-cover-node-1: 2 new triples (965)
- INFO - --- Sequence: atomic-extraction-sequence
- INFO - ----- create-atom-class-net: 1/34 new triples (966)
- DEBUG - ----- create-individual-net-1: 0/7 new triples (966)
- INFO - ----- create-atom-property-net-1: 1/76 new triples (967)
- DEBUG - ----- create-phenomena-net-1: 0/25 new triples (967)
- INFO - --- Sequence: phenomena-checking-sequence - INFO - --- Sequence: phenomena-checking-sequence
- INFO - ----- expand-and-conjunction-phenomena-net: 4/4 new triples (969) - INFO - ----- expand-and-conjunction-phenomena-net: 4/4 new triples (971)
- DEBUG - ----- expand-degree-phenomena-net-1: 0/0 new triples (969) - DEBUG - ----- expand-degree-phenomena-net-1: 0/0 new triples (971)
- DEBUG - ----- expand-degree-phenomena-net-2: 0/0 new triples (969) - DEBUG - ----- expand-degree-phenomena-net-2: 0/0 new triples (971)
- DEBUG - ----- expand-degree-phenomena-net-3: 0/0 new triples (969) - DEBUG - ----- expand-degree-phenomena-net-3: 0/0 new triples (971)
- DEBUG - ----- expand-degree-phenomena-net-4: 0/0 new triples (969) - DEBUG - ----- expand-degree-phenomena-net-4: 0/0 new triples (971)
- DEBUG - ----- expand-degree-phenomena-net-5: 0/0 new triples (969) - DEBUG - ----- expand-degree-phenomena-net-5: 0/0 new triples (971)
- DEBUG - ----- expand-degree-phenomena-net-6: 0/0 new triples (969) - DEBUG - ----- expand-degree-phenomena-net-6: 0/0 new triples (971)
- INFO - --- Sequence: composite-property-extraction-sequence - INFO - --- Sequence: composite-property-extraction-sequence
- DEBUG - ----- create-composite-class-net-from-property-1: 0/0 new triples (969) - DEBUG - ----- create-composite-class-net-from-property-1: 0/0 new triples (971)
- DEBUG - ----- create-composite-class-net-from-property-2: 0/0 new triples (969) - DEBUG - ----- create-composite-class-net-from-property-2: 0/0 new triples (971)
- INFO - --- Sequence: composite-class-extraction-sequence-1 - INFO - --- Sequence: composite-class-extraction-sequence-1
- INFO - ----- create-composite-class-net-from-property-1: 75/79 new triples (1044) - INFO - ----- create-composite-class-net-from-property-1: 75/79 new triples (1046)
- DEBUG - ----- (refinement) refine-cover-node-1: 12 new triples (1056) - DEBUG - ----- (refinement) refine-cover-node-1: 12 new triples (1058)
- DEBUG - ----- (refinement) refine-cover-node-2: 4 new triples (1060) - DEBUG - ----- (refinement) refine-cover-node-2: 4 new triples (1062)
- DEBUG - ----- create-composite-class-net-from-property-2: 0/0 new triples (1060) - DEBUG - ----- create-composite-class-net-from-property-2: 0/0 new triples (1062)
- DEBUG - ----- create-composite-class-net-from-property-3: 0/0 new triples (1060) - DEBUG - ----- create-composite-class-net-from-property-3: 0/0 new triples (1062)
- INFO - --- Sequence: composite-class-extraction-sequence-2 - INFO - --- Sequence: composite-class-extraction-sequence-2
- DEBUG - ----- create-composite-class-net-from-phenomena-1: 0/0 new triples (1060) - DEBUG - ----- create-composite-class-net-from-phenomena-1: 0/0 new triples (1062)
- DEBUG - ----- create-composite-class-net-from-phenomena-2: 0/0 new triples (1060) - DEBUG - ----- create-composite-class-net-from-phenomena-2: 0/0 new triples (1062)
- DEBUG - ----- create-composite-class-net-from-phenomena-3: 0/0 new triples (1060) - DEBUG - ----- create-composite-class-net-from-phenomena-3: 0/0 new triples (1062)
- DEBUG - ----- create-composite-class-net-from-phenomena-4: 0/0 new triples (1060) - DEBUG - ----- create-composite-class-net-from-phenomena-4: 0/0 new triples (1062)
- INFO - --- Sequence: phenomena-checking-sequence - INFO - --- Sequence: phenomena-checking-sequence
- INFO - ----- expand-and-conjunction-phenomena-net: 1/5 new triples (1061) - INFO - ----- expand-and-conjunction-phenomena-net: 1/5 new triples (1063)
- DEBUG - ----- expand-degree-phenomena-net-1: 0/0 new triples (1061) - DEBUG - ----- expand-degree-phenomena-net-1: 0/0 new triples (1063)
- DEBUG - ----- expand-degree-phenomena-net-2: 0/0 new triples (1061) - DEBUG - ----- expand-degree-phenomena-net-2: 0/0 new triples (1063)
- DEBUG - ----- expand-degree-phenomena-net-3: 0/0 new triples (1061) - DEBUG - ----- expand-degree-phenomena-net-3: 0/0 new triples (1063)
- DEBUG - ----- expand-degree-phenomena-net-4: 0/0 new triples (1061) - DEBUG - ----- expand-degree-phenomena-net-4: 0/0 new triples (1063)
- DEBUG - ----- expand-degree-phenomena-net-5: 0/0 new triples (1061) - DEBUG - ----- expand-degree-phenomena-net-5: 0/0 new triples (1063)
- DEBUG - ----- expand-degree-phenomena-net-6: 0/0 new triples (1061) - DEBUG - ----- expand-degree-phenomena-net-6: 0/0 new triples (1063)
- INFO - --- Sequence: composite-property-extraction-sequence - INFO - --- Sequence: composite-property-extraction-sequence
- DEBUG - ----- create-composite-class-net-from-property-1: 0/0 new triples (1061) - DEBUG - ----- create-composite-class-net-from-property-1: 0/0 new triples (1063)
- DEBUG - ----- create-composite-class-net-from-property-2: 0/0 new triples (1061) - DEBUG - ----- create-composite-class-net-from-property-2: 0/0 new triples (1063)
- INFO - --- Sequence: composite-class-extraction-sequence-1 - INFO - --- Sequence: composite-class-extraction-sequence-1
- INFO - ----- create-composite-class-net-from-property-1: 94/173 new triples (1155) - INFO - ----- create-composite-class-net-from-property-1: 94/173 new triples (1157)
- DEBUG - ----- (refinement) refine-cover-node-1: 15 new triples (1170) - DEBUG - ----- (refinement) refine-cover-node-1: 15 new triples (1172)
- DEBUG - ----- (refinement) refine-cover-node-2: 5 new triples (1175) - DEBUG - ----- (refinement) refine-cover-node-2: 5 new triples (1177)
- DEBUG - ----- create-composite-class-net-from-property-2: 0/0 new triples (1175) - DEBUG - ----- create-composite-class-net-from-property-2: 0/0 new triples (1177)
- DEBUG - ----- create-composite-class-net-from-property-3: 0/0 new triples (1175) - DEBUG - ----- create-composite-class-net-from-property-3: 0/0 new triples (1177)
- INFO - --- Sequence: composite-class-extraction-sequence-2 - INFO - --- Sequence: composite-class-extraction-sequence-2
- DEBUG - ----- create-composite-class-net-from-phenomena-1: 0/0 new triples (1175) - DEBUG - ----- create-composite-class-net-from-phenomena-1: 0/0 new triples (1177)
- DEBUG - ----- create-composite-class-net-from-phenomena-2: 0/0 new triples (1175) - DEBUG - ----- create-composite-class-net-from-phenomena-2: 0/0 new triples (1177)
- DEBUG - ----- create-composite-class-net-from-phenomena-3: 0/0 new triples (1175) - DEBUG - ----- create-composite-class-net-from-phenomena-3: 0/0 new triples (1177)
- DEBUG - ----- create-composite-class-net-from-phenomena-4: 0/0 new triples (1175) - DEBUG - ----- create-composite-class-net-from-phenomena-4: 0/0 new triples (1177)
- INFO - --- Sequence: restriction-adding-sequence - INFO - --- Sequence: restriction-adding-sequence
- DEBUG - ----- add-restriction-to-class-net-from-property-1: 0/0 new triples (1175) - DEBUG - ----- add-restriction-to-class-net-from-property-1: 0/0 new triples (1177)
- INFO - --- Sequence: classification-sequence - INFO - --- Sequence: classification-sequence
- INFO - ----- classify-net-from-core-1: 12/12 new triples (1187) - INFO - ----- classify-net-from-core-1: 12/12 new triples (1189)
- INFO - ----- classify-net-from-core-2: 1/9 new triples (1188) - INFO - ----- classify-net-from-core-2: 1/9 new triples (1190)
- DEBUG - ----- classify-net-from-core-3: 0/0 new triples (1188) - DEBUG - ----- classify-net-from-core-3: 0/0 new triples (1190)
- DEBUG - ----- classify-net-from-mod: 0/0 new triples (1188) - DEBUG - ----- classify-net-from-mod: 0/0 new triples (1190)
- DEBUG - ----- classify-net-from-part: 0/0 new triples (1188) - DEBUG - ----- classify-net-from-part: 0/0 new triples (1190)
- INFO - ----- classify-net-from-domain: 5/5 new triples (1193) - INFO - ----- classify-net-from-domain: 6/6 new triples (1196)
- DEBUG - ----- classify-net-from-degree-phenomena-1: 0/0 new triples (1193) - DEBUG - ----- classify-net-from-degree-phenomena-1: 0/0 new triples (1196)
- DEBUG - ----- classify-net-from-degree-phenomena-2: 0/0 new triples (1193) - DEBUG - ----- classify-net-from-degree-phenomena-2: 0/0 new triples (1196)
- DEBUG - ----- classify-net-from-degree-phenomena-3: 0/0 new triples (1193) - DEBUG - ----- classify-net-from-degree-phenomena-3: 0/0 new triples (1196)
- DEBUG - ----- propagate-individual-1: 0/1 new triples (1193) - DEBUG - ----- propagate-individual-1: 0/1 new triples (1196)
- INFO - ----- propagate-individual-2: 6/6 new triples (1199) - INFO - ----- propagate-individual-2: 6/6 new triples (1202)
- DEBUG - ----- reclassify-deprecated-net: 0/0 new triples (1199) - DEBUG - ----- reclassify-deprecated-net: 0/0 new triples (1202)
- DEBUG - --- Serializing graph to SolarSystemDev1_transduction - DEBUG - --- Serializing graph to SolarSystemDev1_transduction
- DEBUG - ----- step: transduction - DEBUG - ----- step: transduction
- DEBUG - ----- id: SolarSystemDev1 - DEBUG - ----- id: SolarSystemDev1
- DEBUG - ----- work_file: ./output/SolarSystemDev1-20221209/SolarSystemDev1-1/SolarSystemDev1_transduction.ttl - DEBUG - ----- work_file: ./output/SolarSystemDev1-20221210/SolarSystemDev1-1/SolarSystemDev1_transduction.ttl
- DEBUG - ----- base: http://SolarSystemDev1/transduction - DEBUG - ----- base: http://SolarSystemDev1/transduction
- INFO - ----- 373 triples extracted during transduction step - INFO - ----- 376 triples extracted during transduction step
- INFO - -- Applying extraction step: generation - INFO - -- Applying extraction step: generation
- INFO - --- Sequence: main-generation-sequence - INFO - --- Sequence: main-generation-sequence
- INFO - ----- compute-uri-for-owl-declaration-1: 14/14 new triples (1213) - INFO - ----- compute-uri-for-owl-declaration-1: 14/14 new triples (1216)
- INFO - ----- compute-uri-for-owl-declaration-2: 1/1 new triples (1214) - INFO - ----- compute-uri-for-owl-declaration-2: 1/1 new triples (1217)
- DEBUG - ----- compute-uri-for-owl-declaration-4: 0/0 new triples (1214) - DEBUG - ----- compute-uri-for-owl-declaration-4: 0/0 new triples (1217)
- INFO - ----- compute-uri-for-owl-declaration-5: 6/6 new triples (1220) - INFO - ----- compute-uri-for-owl-declaration-5: 6/6 new triples (1223)
- INFO - ----- compute-uri-for-owl-declaration-6: 6/6 new triples (1226) - INFO - ----- compute-uri-for-owl-declaration-6: 6/6 new triples (1229)
- INFO - ----- generate-atom-class: 12/12 new triples (1238) - INFO - ----- generate-atom-class: 12/12 new triples (1241)
- INFO - ----- classify-atom-class-1: 4/4 new triples (1242) - INFO - ----- classify-atom-class-1: 4/4 new triples (1245)
- INFO - ----- classify-atom-class-2: 1/1 new triples (1243) - INFO - ----- classify-atom-class-2: 1/1 new triples (1246)
- INFO - ----- generate-individual: 3/3 new triples (1246) - INFO - ----- generate-individual: 3/3 new triples (1249)
- INFO - ----- classify-individual: 6/6 new triples (1252) - INFO - ----- classify-individual: 6/6 new triples (1255)
- INFO - ----- generate-atom-property-1: 20/20 new triples (1272) - INFO - ----- generate-atom-property-1: 20/20 new triples (1275)
- INFO - ----- generate-atom-property-12: 12/20 new triples (1284) - INFO - ----- generate-atom-property-12: 12/20 new triples (1287)
- DEBUG - ----- generate-inverse-relation: 0/0 new triples (1284) - DEBUG - ----- generate-inverse-relation: 0/0 new triples (1287)
- INFO - ----- generate-composite-class: 38/38 new triples (1322) - INFO - ----- generate-composite-class: 38/38 new triples (1325)
- DEBUG - ----- add-restriction-to-class-1: 0/0 new triples (1322) - DEBUG - ----- add-restriction-to-class-1: 0/0 new triples (1325)
- DEBUG - ----- add-restriction-to-class-2: 0/0 new triples (1322) - DEBUG - ----- add-restriction-to-class-2: 0/0 new triples (1325)
- INFO - ----- add-restriction-to-class-3: 36/45 new triples (1358) - INFO - ----- add-restriction-to-class-3: 36/45 new triples (1361)
- DEBUG - ----- add-restriction-to-class-4: 0/0 new triples (1358) - DEBUG - ----- add-restriction-to-class-4: 0/0 new triples (1361)
- DEBUG - ----- add-restriction-to-class-5: 0/0 new triples (1358) - DEBUG - ----- add-restriction-to-class-5: 0/0 new triples (1361)
- DEBUG - ----- add-restriction-to-class-6: 0/0 new triples (1358) - DEBUG - ----- add-restriction-to-class-6: 0/0 new triples (1361)
- DEBUG - ----- generate-composite-property: 0/0 new triples (1358) - DEBUG - ----- generate-composite-property: 0/0 new triples (1361)
- DEBUG - --- Serializing graph to SolarSystemDev1_generation - DEBUG - --- Serializing graph to SolarSystemDev1_generation
- DEBUG - ----- step: generation - DEBUG - ----- step: generation
- DEBUG - ----- id: SolarSystemDev1 - DEBUG - ----- id: SolarSystemDev1
- DEBUG - ----- work_file: ./output/SolarSystemDev1-20221209/SolarSystemDev1-1/SolarSystemDev1_generation.ttl - DEBUG - ----- work_file: ./output/SolarSystemDev1-20221210/SolarSystemDev1-1/SolarSystemDev1_generation.ttl
- DEBUG - ----- base: http://SolarSystemDev1/generation - DEBUG - ----- base: http://SolarSystemDev1/generation
- INFO - ----- 159 triples extracted during generation step - INFO - ----- 159 triples extracted during generation step
- INFO - -- Result: file containing only the factoids - INFO - -- Result: file containing only the factoids
- DEBUG - --- Making factoid graph with the last step result - DEBUG - --- Making factoid graph with the last step result
- DEBUG - ----- Number of factoids: 176 - DEBUG - ----- Number of factoids: 176
- DEBUG - ----- Graph base: http://SolarSystemDev1/factoid - DEBUG - ----- Graph base: http://SolarSystemDev1/factoid
- DEBUG - --- Serializing graph to factoid file (./output/SolarSystemDev1-20221209/SolarSystemDev1-1/SolarSystemDev1_factoid.ttl) - DEBUG - --- Serializing graph to factoid file (./output/SolarSystemDev1-20221210/SolarSystemDev1-1/SolarSystemDev1_factoid.ttl)
- INFO - - INFO -
*** Execution Time *** *** Execution Time ***
----- Function: apply (lib.tenet_extraction) ----- Function: apply (lib.tenet_extraction)
----- Total Time: 0:00:07.336335 ----- Total Time: 0:00:07.319353
----- Process Time: 0:00:07.319472 ----- Process Time: 0:00:07.293875
*** - *** *** - ***
- INFO - === Final Ontology Generation === - INFO - === Final Ontology Generation ===
- INFO - -- Making complete factoid graph by merging sentence factoid graphs - INFO - -- Making complete factoid graph by merging sentence factoid graphs
- INFO - ----- Total factoid number: 176 - INFO - ----- Total factoid number: 176
- INFO - ----- Graph base: http://SolarSystemDev1/factoid - INFO - ----- Graph base: http://SolarSystemDev1/factoid
- INFO - -- Serializing graph to factoid file (./output/SolarSystemDev1-20221209/SolarSystemDev1_factoid.ttl) - INFO - -- Serializing graph to factoid file (./output/SolarSystemDev1-20221210/SolarSystemDev1_factoid.ttl)
- INFO - === Done === - INFO - === Done ===
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