Main

mcli

 #!/usr/bin/env bash
 
-# 'status' command is an exception, must be run before setting all the env vars
-if [[ "$1" == "status" ]]; then
-    echo "VERSION=$VERSION"
-    echo "MACAO_ROOT=$MACAO_ROOT"
-    echo "SOURCES_DIR=$SOURCES_DIR"
-    echo "SCRIPTS_DIR=$SCRIPTS_DIR"
-    echo "RESULTS_DIR=$RESULTS_DIR"
-    echo "INDEXES_DIR=$INDEXES_DIR"
-    echo ""
-    echo "Python virtual env: ${VIRTUAL_ENV:-"not set"}"
-    echo -n "mcli: "
-    if which mcli >/dev/null; then echo "available"; else echo "not in PATH"; fi
-    echo ""
-    git status
-    exit
+# Default value for version env var
+if [[ -z "$VERSION" ]]; then
+    VERSION="all"
 fi
-
-export VERSION="macao_${VERSION:-12}" # macao_12 by default
+# First parameter overrides version if set
+if [[ "$1" == "12" || "$1" == "3" ]]; then
+    VERSION="macao_$1"
+    shift
+elif [[ "$1" == "all" ]]; then
+    VERSION="all"
+    shift
+fi
+export VERSION
 export MACAO_ROOT="${MACAO_ROOT:-$(dirname "$(realpath "$0")")}"
-export SOURCES_DIR="$MACAO_ROOT/Basilisk/MACAO/$VERSION"
-export SCRIPTS_DIR="$MACAO_ROOT/tetras_extraction/$VERSION/script"
+SOURCES_DIR="$MACAO_ROOT/Basilisk/MACAO"
+[[ "$VERSION" != "all" ]] && SOURCES_DIR="$SOURCES_DIR/$VERSION"
+export SOURCES_DIR
+export SCRIPTS_DIR="$MACAO_ROOT/tetras_extraction/macao_12/script"
 export RESULTS_DIR="$MACAO_ROOT/tetras_extraction/$VERSION/result"
 export INDEXES_DIR="$RESULTS_DIR/indexes"
 mkdir -p "$INDEXES_DIR"
@@ -241,6 +238,20 @@ shell)
     cd "$MACAO_ROOT"
     $SHELL
     ;;
+status)
+    echo "VERSION=$VERSION"
+    echo "MACAO_ROOT=$MACAO_ROOT"
+    echo "SOURCES_DIR=$SOURCES_DIR"
+    echo "SCRIPTS_DIR=$SCRIPTS_DIR"
+    echo "RESULTS_DIR=$RESULTS_DIR"
+    echo "INDEXES_DIR=$INDEXES_DIR"
+    echo ""
+    echo "Python virtual env: ${VIRTUAL_ENV:-"not set"}"
+    echo -n "mcli: "
+    if which mcli >/dev/null; then echo "available"; else echo "not in PATH"; fi
+    echo ""
+    cd "$MACAO_ROOT" && git status
+    ;;
 *)
     print_usage
     ;;