From 4bc1bcae40788d585b99505ecd557f975e986084 Mon Sep 17 00:00:00 2001
From: =?UTF-8?q?Aur=C3=A9lien=20Lamercerie?=
<aurelien.lamercerie@tetras-libre.fr>
Date: Sat, 18 Feb 2023 13:24:26 +0100
Subject: [PATCH] New transduction package: add rdfterm_computer module
---
tenet/febTransduction/net/net.py | 2 +-
.../phenomena_application_or.py | 204 ---------------
...uriref_computer.py => rdfterm_computer.py} | 20 +-
tenet/tenet.log | 237 ------------------
tests/test_rule.py | 35 ++-
...y => test_transduction_naming_computer.py} | 0
... => test_transduction_rdfterm_computer.py} | 6 +-
...py => test_transduction_semantic_net_1.py} | 0
...py => test_transduction_semantic_net_2.py} | 0
...py => test_transduction_semantic_net_3.py} | 0
...py => test_transduction_semantic_net_4.py} | 0
11 files changed, 42 insertions(+), 462 deletions(-)
delete mode 100644 tenet/febTransduction/phenomena_application_or.py
rename tenet/febTransduction/{uriref_computer.py => rdfterm_computer.py} (77%)
rename tests/{test_naming_computer.py => test_transduction_naming_computer.py} (100%)
rename tests/{test_transduction_uriref_computer.py => test_transduction_rdfterm_computer.py} (97%)
rename tests/{test_semantic_net_1.py => test_transduction_semantic_net_1.py} (100%)
rename tests/{test_semantic_net_2.py => test_transduction_semantic_net_2.py} (100%)
rename tests/{test_semantic_net_3.py => test_transduction_semantic_net_3.py} (100%)
rename tests/{test_semantic_net_4.py => test_transduction_semantic_net_4.py} (100%)
diff --git a/tenet/febTransduction/net/net.py b/tenet/febTransduction/net/net.py
index d2c0cf10..61404c55 100644
--- a/tenet/febTransduction/net/net.py
+++ b/tenet/febTransduction/net/net.py
@@ -14,7 +14,7 @@ from rdflib.namespace import NamespaceManager
from rdflib.term import _is_valid_uri
from febTransduction.net import SemanticNetReferenceHandle
-from febTransduction.uriref_computer import produce_uriref
+from febTransduction.rdfterm_computer import produce_uriref
from febTransduction.query_builder import generate_select_query
diff --git a/tenet/febTransduction/phenomena_application_or.py b/tenet/febTransduction/phenomena_application_or.py
deleted file mode 100644
index 4cb1586e..00000000
--- a/tenet/febTransduction/phenomena_application_or.py
+++ /dev/null
@@ -1,204 +0,0 @@
-#!/usr/bin/python3.10
-# -*-coding:Utf-8 -*
-
-#==============================================================================
-# TENET: AMR CTR at 'Net Expansion' level for phenomena application (or)
-#------------------------------------------------------------------------------
-# Module grouping compositional transduction rule_sets (CTR) for the analysis
-# of AMR structures, at 'Net Expansion' level
-#==============================================================================
-
-import subprocess, os
-from rdflib import Graph
-from rdflib import Namespace
-from rdflib.namespace import NamespaceManager
-
-if __name__ == '__main__':
- import os, sys
- LIB_PATH = f'{os.path.dirname(os.path.abspath(__file__))}/..'
- sys.path.insert(0, os.path.abspath(LIB_PATH))
- print(sys.path[0])
-
-import febTransduction as transduction
-from febTransduction import net
-from febTransduction.query_builder import generate_select_query
-from febTransduction.naming_computer import define_composite_naming_1
-
-
-#==============================================================================
-# Rule with pattern property(class, or_phenomena)
-#==============================================================================
-
-def __select_pattern_1():
-
- # -- Select Data List
- select_data_list = ['?property_net', '?class_net', '?phenomena_net']
-
- # -- Clause List
- clause_list = []
- clause_list.append(f'?property_net a [rdfs:subClassOf* net:Property_Net].')
- clause_list.append(f'?class_net a [rdfs:subClassOf* net:Class_Net].')
- clause_list.append(f'?phenomena_net a [rdfs:subClassOf* net:Phenomena_Net].')
- clause_list.append(f'?phenomena_net net:hasPhenomenaType amr:phenomena_conjunction_or.')
- clause_list.append(f'?property_net amr:role_ARG0 ?class_net.')
- clause_list.append(f'?property_net amr:role_ARG1 ?phenomena_net.')
-
- # -- Query Generation
- query_code = transduction.query_builder.generate_select_query(select_data_list, clause_list)
-
- return query_code
-
- # pattern = transduction.Pattern('class_net', 'property_net', 'phenomena_net')
- # pattern.add_identification_pattern(phenomena_net, phenomena_type='amr:phenomena_conjunction_or')
- # pattern.add_composition_pattern(property_net, 'amr:role_ARG0', class_net_0)
- # pattern.add_composition_pattern(property_net, 'amr:role_ARG1', phenomena_net)
- # pattern_query = pattern.get_select_query()
- # return pattern_query
-
-
-def __op_pattern_1(phenomena_net_uri, num):
-
- assert 1 <= num <= 9
-
- # -- Select Data List
- select_data_list = ['?class_net']
-
- # -- Clause List
- clause_list = []
- clause_list.append(f'?class_net a [rdfs:subClassOf* net:Class_Net].')
- clause_list.append(f'{phenomena_net_uri} amr:role_op{num} ?class_net.')
-
- # -- Query Generation
- query_code = transduction.query_builder.generate_select_query(select_data_list, clause_list)
-
- return query_code
-
-
-def __define_restriction(net, op_set): # TODO
- pass
- return net
-
-
-def analyze_phenomena_or_1(graph):
-
- # -- Rule Initialization
- rule_label = '"or" phenomena analysis 1 [ property(class, or_phenomena) ]'
- print(f"--- *** February Transduction *** Sequence: {rule_label}")
- #logger.info(f"--- *** February Transduction *** Sequence: {rule_label}")
-
- # -- Selection Pattern Application
- query_code = __select_pattern_1()
- pattern_set = graph.query(query_code)
-
- # -- New Net Computing
- new_triple_list = []
- for selection in pattern_set:
-
- # -- Net Composition
- class_net = net.ClassNet(graph, selection.class_net)
- property_net = net.PropertyNet(graph, selection.property_net)
- phenomena_net = net.PhenomenaNet(graph, selection.phenomena_net)
- composite_class_net = net.CompositeClassNet(graph)
- composite_class_net.compose(class_net, property_net, phenomena_net)
-
- # -- Data Computation
- composite_class_net.mother_class_net = class_net.uri
- # etc
-
- # -- Restriction Computation
- pass # TODO
- # for num in range(1, 9+1):
- # query_code = __op_pattern_1(selection.phenomena_net, num)
- # op_set = graph.query(query_code)
- # composite_class_net = __define_restriction(composite_class_net, op_set)
-
- # -- Relation Propagation
- pass # TODO
- # for (n1, rel, _) in class_net.input_relation_list:
- # composite_class_net.add_input_relation(n1, rel)
- # TODO: à voir si on veut d'autres relations
-
- # -- Net Naming
- composite_class_net.naming = define_composite_naming_1(class_net, property_net, phenomena_net)
-
- # -- Finalization
- composite_class_net.finalize()
- new_triples = composite_class_net.generate_triple_definition()
- new_triple_list.append(new_triples)
-
- return rule_label, new_triple_list
-
-
-#==============================================================================
-# Rule with pattern property(property, or_phenomena)
-#==============================================================================
-
-def __select_pattern_2():
-
- # -- Select Data List
- select_data_list = ['?property_net', '?property_net_0', '?phenomena_net']
-
- # -- Clause List
- clause_list = []
- clause_list.append(f'?property_net a [rdfs:subClassOf* net:Property_Net].')
- clause_list.append(f'?property_net_0 a [rdfs:subClassOf* net:Property_Net].')
- clause_list.append(f'?phenomena_net a [rdfs:subClassOf* net:Phenomena_Net].')
- clause_list.append(f'?phenomena_net net:hasPhenomenaType amr:phenomena_conjunction_or.')
- clause_list.append(f'?property_net amr:role_ARG0 ?property_net_0.')
- clause_list.append(f'?property_net amr:role_ARG1 ?phenomena_net.')
-
- # -- Query Generation
- query_code = transduction.query_builder.generate_select_query(select_data_list, clause_list)
-
- return query_code
-
-
-def analyze_phenomena_or_2(graph):
-
- # -- Rule Initialization
- rule_label = '"or" phenomena analysis 2 [ property(property, or_phenomena) ]'
- print(f"--- *** February Transduction *** Sequence: {rule_label}")
-
- # -- Selection Pattern Application
- query_code = __select_pattern_2()
- pattern_set = graph.query(query_code)
-
- # -- New Net Computing
- new_triple_list = []
- for selection in pattern_set:
-
- # -- Net Composition
- property_net_0 = net.PropertyNet(graph, uri=selection.property_net_0)
- property_net = net.PropertyNet(graph, uri=selection.property_net)
- phenomena_net = net.PhenomenaNet(graph, uri=selection.phenomena_net)
- composite_class_net = net.CompositeClassNet(graph)
- composite_class_net.compose(property_net_0, property_net, phenomena_net)
-
- # -- Data Computation
- composite_class_net.mother_class_net = property_net_0.uri
- # etc
-
- # -- Restriction Computation
- pass # TODO
- # for num in range(1, 9+1):
- # query_code = __op_pattern_1(selection.phenomena_net, num)
- # op_set = graph.query(query_code)
- # composite_class_net = __define_restriction(composite_class_net, op_set)
-
- # -- Relation Propagation
- pass # TODO
- # for (n1, rel, _) in class_net.input_relation_list:
- # composite_class_net.add_input_relation(n1, rel)
- # TODO: à voir si on veut d'autres relations
-
- # -- Net Naming
- composite_class_net.naming = define_composite_naming_1(property_net_0, property_net, phenomena_net)
-
- # -- Finalization
- composite_class_net.finalize()
- new_triples = composite_class_net.generate_triple_definition()
- new_triple_list += new_triples
-
- return rule_label, new_triple_list
-
-
\ No newline at end of file
diff --git a/tenet/febTransduction/uriref_computer.py b/tenet/febTransduction/rdfterm_computer.py
similarity index 77%
rename from tenet/febTransduction/uriref_computer.py
rename to tenet/febTransduction/rdfterm_computer.py
index 9eb1f0b0..64cf602e 100644
--- a/tenet/febTransduction/uriref_computer.py
+++ b/tenet/febTransduction/rdfterm_computer.py
@@ -15,7 +15,7 @@ from rdflib.term import _is_valid_uri
#==============================================================================
-# Main Method(s)
+# Method to produce URIRef
#==============================================================================
def __create_uriref(uri):
@@ -52,11 +52,17 @@ def produce_uriref(graph, uri):
own validation checks.
"""
+ uriref = None
if uri is not None:
- uri = __create_uriref(uri)
- uri = __update_uri_with_prefix(graph, uri)
- uri = __create_uriref(uri)
- assert _is_valid_uri(uri), f'Houston, we have a problem: URI is not a valid uri'
+ uriref = __create_uriref(uri)
+ uriref = __update_uri_with_prefix(graph, uriref)
+ uriref = __create_uriref(uriref)
+ assert _is_valid_uri(uriref), f'Houston, we have a problem: URI is not a valid uri'
- return uri
-
\ No newline at end of file
+ return uriref
+
+
+
+#==============================================================================
+# Method to produce Litteral
+#==============================================================================
\ No newline at end of file
diff --git a/tenet/tenet.log b/tenet/tenet.log
index ef66b101..e69de29b 100644
--- a/tenet/tenet.log
+++ b/tenet/tenet.log
@@ -1,237 +0,0 @@
-- INFO - [TENET] Extraction Processing
-- INFO -
- === Process Initialization ===
-- INFO - -- Process Setting
-- INFO - ----- Corpus source: /home/lamenji/Workspace/Tetras/tenet/tests/input/amrDocuments/dev/solar-system-01/ (amr)
-- INFO - ----- Base output dir: /home/lamenji/Workspace/Tetras/tenet/tests/output/SolarSystemDev01-20230217/SolarSystemDev01_factoid.ttl
-- INFO - ----- technical dir path: /home/lamenji/Workspace/Tetras/tenet/tests/output/SolarSystemDev01-20230217/technical-data/
-- INFO - ----- Ontology target (id): SolarSystemDev01
-- INFO - ----- Current path: /home/lamenji/Workspace/Tetras/tenet/tenet
-- DEBUG - ----- Config file: /home/lamenji/Workspace/Tetras/tenet/tenet/config.xml
-- DEBUG -
- *** Config (Full Parameters) ***
- -- Base Parameters
- ----- config file: /home/lamenji/Workspace/Tetras/tenet/tenet/config.xml
- ----- uuid: SolarSystemDev01
- ----- source corpus: /home/lamenji/Workspace/Tetras/tenet/tests/input/amrDocuments/dev/solar-system-01/
- ----- target reference: base
- ----- process level: sentence
- ----- source type: amr
- -- Compositional Transduction Scheme (CTS)
- ----- CTS reference: amr_scheme_1
- -- Directories
- ----- base directory: ./
- ----- structure directory: ./structure/
- ----- CTS directory: ./scheme/
- ----- target frame directory: ./../input/targetFrameStructure/
- ----- input document directory:
- ----- base output dir: /home/lamenji/Workspace/Tetras/tenet/tests/output/SolarSystemDev01-20230217/SolarSystemDev01_factoid.ttl
- ----- output directory: /home/lamenji/Workspace/Tetras/tenet/tests/output/SolarSystemDev01-20230217/SolarSystemDev01_factoid.ttlSolarSystemDev01-20230217/
- ----- sentence output directory: /home/lamenji/Workspace/Tetras/tenet/tests/output/SolarSystemDev01-20230217/technical-data/
- ----- technical dir path: /home/lamenji/Workspace/Tetras/tenet/tests/output/SolarSystemDev01-20230217/technical-data/
- -- Config File Definition
- ----- schema file: ./structure/amr-rdf-schema.ttl
- ----- semantic net file: ./structure/semantic-net.ttl
- ----- config param file: ./structure/config-parameters.ttl
- ----- base ontology file: ./structure/base-ontology.ttl
- ----- CTS file: ./scheme/amr_scheme_1.py
- -- Useful References for Ontology
- ----- base URI: https://tenet.tetras-libre.fr/working
- ----- ontology suffix: -ontology.ttl
- ----- ontology seed suffix: -ontology-seed.ttl
- -- Source File Definition
- ----- source sentence file: /home/lamenji/Workspace/Tetras/tenet/tests/input/amrDocuments/dev/solar-system-01/**/*.ttl
- -- Target File Definition
- ----- frame ontology file: ./../input/targetFrameStructure/base-ontology.ttl
- ----- frame ontology seed file: ./../input/targetFrameStructure/base-ontology-seed.ttl
- -- Output
- ----- ontology namespace: https://tenet.tetras-libre.fr/base-ontology/
- ----- output file: /home/lamenji/Workspace/Tetras/tenet/tests/output/SolarSystemDev01-20230217/technical-data/SolarSystemDev01.ttl
- *** - ***
-- DEBUG - -- Counting number of graph files (sentences)
-- INFO - ----- Number of Graphs: 1
-- INFO -
- === Extraction Processing ===
-- INFO - *** sentence 1 ***
-- INFO - -- Work Structure Preparation
-- DEBUG - --- Graph Initialization
-- DEBUG - ----- Configuration Loading
-- DEBUG - -------- RDF Schema (302)
-- DEBUG - -------- Semantic Net Definition (509)
-- DEBUG - -------- Config Parameter Definition (543)
-- DEBUG - ----- Frame Ontology Loading
-- DEBUG - -------- Base Ontology produced as output (573)
-- DEBUG - --- Source Data Import
-- DEBUG - ----- Sentence Loading
-- DEBUG - -------- /home/lamenji/Workspace/Tetras/tenet/tests/input/amrDocuments/dev/solar-system-01/SSC-01-01.stog.amr.ttl (621)
-- DEBUG - --- Export work graph as turtle
-- DEBUG - ----- Work graph file: /home/lamenji/Workspace/Tetras/tenet/tests/output/SolarSystemDev01-20230217/technical-data/SolarSystemDev01-1/SolarSystemDev01.ttl
-- INFO - ----- Sentence (id): SSC-01-01
-- INFO - ----- Sentence (text): The Solar System is the gravitationally bound system of the Sun and the objects that orbit it, either directly or indirectly.
-- INFO - -- Loading Extraction Scheme (amr_scheme_1)
-- DEBUG - ----- Step number: 3
-- INFO - -- Loading Extraction Rules (amr_rule/*)
-- DEBUG - ----- Total rule number: 87
-- INFO - -- Applying extraction step: preprocessing
-- INFO - --- *** November Transduction *** Sequence: amrld-correcting-sequence
-- INFO - ----- fix-amr-bug-about-system-solar-planet: 5/5 new triples (626, 0:00:00.048350)
-- INFO - --- *** November Transduction *** Sequence: amr-reification-sequence
-- INFO - ----- reclassify-concept-1: 10/10 new triples (636, 0:00:00.131841)
-- DEBUG - ----- reclassify-concept-2: 0/0 new triple (636, 0:00:00.074151)
-- INFO - ----- reclassify-concept-3: 12/12 new triples (648, 0:00:00.050096)
-- INFO - ----- reclassify-concept-4: 16/16 new triples (664, 0:00:00.069943)
-- INFO - ----- reclassify-concept-5: 2/4 new triples (666, 0:00:00.042364)
-- INFO - ----- reify-roles-as-concept: 10/10 new triples (676, 0:00:00.054633)
-- INFO - ----- reclassify-existing-variable: 45/45 new triples (721, 0:00:00.035203)
-- INFO - ----- add-new-variable-for-reified-concept: 8/8 new triples (729, 0:00:00.063932)
-- INFO - ----- add-amr-leaf-for-reclassified-concept: 33/33 new triples (762, 0:00:00.046697)
-- INFO - ----- add-amr-leaf-for-reified-concept: 8/8 new triples (770, 0:00:00.062658)
-- INFO - ----- add-amr-edge-for-core-relation: 27/27 new triples (797, 0:00:00.119510)
-- INFO - ----- add-amr-edge-for-reified-concept: 12/12 new triples (809, 0:00:00.134834)
-- INFO - ----- add-amr-edge-for-name-relation: 5/5 new triples (814, 0:00:00.060733)
-- DEBUG - ----- add-value-for-quant-relation: 0/0 new triple (814, 0:00:00.069739)
-- INFO - ----- add-amr-edge-for-polarity-relation: 5/5 new triples (819, 0:00:00.066134)
-- INFO - ----- update-amr-edge-role-1: 15/15 new triples (834, 0:00:00.101905)
-- INFO - ----- add-amr-root: 5/5 new triples (839, 0:00:00.024756)
-- DEBUG - --- Serializing graph to SolarSystemDev01_preprocessing
-- DEBUG - ----- step: preprocessing
-- DEBUG - ----- id: SolarSystemDev01
-- DEBUG - ----- work_file: /home/lamenji/Workspace/Tetras/tenet/tests/output/SolarSystemDev01-20230217/technical-data/SolarSystemDev01-1/SolarSystemDev01_preprocessing.ttl
-- DEBUG - ----- base: http://SolarSystemDev01/preprocessing
-- INFO - ----- 218 triples extracted during preprocessing step
-- INFO - -- Applying extraction step: transduction
-- INFO - --- *** November Transduction *** Sequence: atomic-extraction-sequence
-- INFO - ----- create-atom-class-net: 35/35 new triples (874, 0:00:00.066367)
-- DEBUG - ----- (refinement) refine-cover-node-1: 5 new triples (879)
-- DEBUG - ----- (refinement) refine-cover-node-2: 5 new triples (884)
-- INFO - ----- create-individual-net-1: 10/10 new triples (894, 0:00:00.087596)
-- DEBUG - ----- (refinement) refine-cover-node-1: 1 new triples (895)
-- INFO - ----- create-atom-property-net-1: 88/88 new triples (983, 0:00:00.146487)
-- DEBUG - ----- (refinement) refine-cover-node-1: 6 new triples (989)
-- INFO - ----- create-value-net: 17/17 new triples (1006, 0:00:00.092233)
-- INFO - ----- create-phenomena-net-1: 24/25 new triples (1030, 0:00:00.073087)
-- DEBUG - ----- (refinement) refine-cover-node-1: 2 new triples (1032)
-- INFO - --- *** November Transduction *** Sequence: atomic-extraction-sequence
-- INFO - ----- create-atom-class-net: 1/49 new triple (1033, 0:00:00.080771)
-- DEBUG - ----- create-individual-net-1: 0/10 new triple (1033, 0:00:00.052563)
-- INFO - ----- create-atom-property-net-1: 1/95 new triple (1034, 0:00:00.154358)
-- DEBUG - ----- create-value-net: 0/17 new triple (1034, 0:00:00.050105)
-- DEBUG - ----- create-phenomena-net-1: 0/25 new triple (1034, 0:00:00.057190)
-- INFO - --- *** November Transduction *** Sequence: phenomena-application-polarity-sequence
-- INFO - ----- polarity-phenomena-application: 8/9 new triples (1042, 0:00:00.109839)
-- DEBUG - ----- (refinement) refine-cover-node-1: 1 new triples (1043)
-- INFO - --- *** November Transduction *** Sequence: phenomena-application-mod-sequence
-- DEBUG - ----- mod-phenomena-application-1: 0/0 new triple (1043, 0:00:00.081777)
-- DEBUG - ----- mod-phenomena-application-2: 0/0 new triple (1043, 0:00:00.038491)
-- DEBUG - ----- mod-phenomena-application-3: 0/0 new triple (1043, 0:00:00.078474)
-- INFO - --- *** November Transduction *** Sequence: phenomena-application-and-sequence
-- INFO - ----- and-conjunction-phenomena-application-1: 14/17 new triples (1057, 0:00:00.170078)
-- DEBUG - ----- (refinement) refine-cover-node-1: 1 new triples (1058)
-- INFO - ----- and-conjunction-phenomena-application-2: 1/1 new triple (1059, 0:00:00.106857)
-- INFO - ----- and-conjunction-phenomena-application-3: 14/14 new triples (1073, 0:00:00.129548)
-- INFO - ----- and-conjunction-phenomena-application-4: 14/14 new triples (1087, 0:00:00.166570)
-- DEBUG - ----- (refinement) refine-cover-node-2: 1 new triples (1088)
-- INFO - ----- and-conjunction-phenomena-application-5: 6/9 new triples (1094, 0:00:00.062548)
-- INFO - ----- and-conjunction-phenomena-application-6: 2/2 new triples (1096, 0:00:00.205600)
-- INFO - --- *** January Transduction *** Sequence: "or" phenomena analysis 1 (targetting class)
-- DEBUG - ----- new net construction: 0/0 new triple (1096, 0:00:00.056004)
-- INFO - --- *** January Transduction *** Sequence: "or" phenomena analysis 2 (targetting property)
-- INFO - ----- new net construction: 9/9 new triples (1105, 0:00:00.055170)
-- INFO - --- *** February Transduction *** Sequence: phenomena_or_analyze_sequence
-- DEBUG - ----- "or" phenomena analysis 1 [ property(class, or_phenomena) ]: 0/0 new triple (1105, 0:00:00.011168)
-- INFO - ----- "or" phenomena analysis 2 [ property(property, or_phenomena) ]: 1/1 new triple (1106, 0:00:00.044370)
-- INFO - --- *** November Transduction *** Sequence: phenomena-checking-sequence
-- INFO - ----- expand-and-conjunction-phenomena-net: 8/8 new triples (1114, 0:00:00.014320)
-- DEBUG - ----- (refinement) refine-cover-node-2: 1 new triples (1115)
-- DEBUG - ----- expand-degree-phenomena-net-1: 0/0 new triple (1115, 0:00:00.008087)
-- DEBUG - ----- expand-degree-phenomena-net-2: 0/0 new triple (1115, 0:00:00.011609)
-- DEBUG - ----- expand-degree-phenomena-net-3: 0/0 new triple (1115, 0:00:00.008746)
-- DEBUG - ----- expand-degree-phenomena-net-4: 0/0 new triple (1115, 0:00:00.007308)
-- DEBUG - ----- expand-degree-phenomena-net-5: 0/0 new triple (1115, 0:00:00.007772)
-- DEBUG - ----- expand-degree-phenomena-net-6: 0/0 new triple (1115, 0:00:00.007716)
-- INFO - --- *** November Transduction *** Sequence: composite-property-extraction-sequence
-- DEBUG - ----- create-composite-class-net-from-property-1: 0/0 new triple (1115, 0:00:00.087769)
-- DEBUG - ----- create-composite-class-net-from-property-2: 0/0 new triple (1115, 0:00:00.224745)
-- INFO - --- *** November Transduction *** Sequence: composite-class-extraction-sequence-1
-- INFO - ----- create-composite-class-net-from-property-1: 48/54 new triples (1163, 0:00:00.555766)
-- DEBUG - ----- (refinement) refine-cover-node-1: 7 new triples (1170)
-- DEBUG - ----- (refinement) refine-cover-node-2: 3 new triples (1173)
-- DEBUG - ----- create-composite-class-net-from-property-2: 0/0 new triple (1173, 0:00:00.130480)
-- INFO - ----- create-composite-class-net-from-property-3: 50/57 new triples (1223, 0:00:00.457728)
-- INFO - --- *** November Transduction *** Sequence: composite-class-extraction-sequence-2
-- DEBUG - ----- create-composite-class-net-from-phenomena-1: 0/0 new triple (1223, 0:00:00.036293)
-- DEBUG - ----- create-composite-class-net-from-phenomena-2: 0/0 new triple (1223, 0:00:00.056631)
-- DEBUG - ----- create-composite-class-net-from-phenomena-3: 0/0 new triple (1223, 0:00:00.037681)
-- DEBUG - ----- create-composite-class-net-from-phenomena-4: 0/0 new triple (1223, 0:00:00.048736)
-- INFO - --- *** November Transduction *** Sequence: restriction-adding-sequence
-- DEBUG - ----- add-restriction-to-class-net-from-property-1: 0/0 new triple (1223, 0:00:00.042469)
-- INFO - --- *** November Transduction *** Sequence: classification-sequence
-- INFO - ----- classify-net-from-core-1: 8/8 new triples (1231, 0:00:00.008805)
-- INFO - ----- classify-net-from-core-2: 1/7 new triple (1232, 0:00:00.008024)
-- DEBUG - ----- classify-net-from-core-3: 0/0 new triple (1232, 0:00:00.045640)
-- DEBUG - ----- classify-net-from-part: 0/0 new triple (1232, 0:00:00.007531)
-- INFO - ----- classify-net-from-domain: 9/9 new triples (1241, 0:00:00.008094)
-- DEBUG - ----- classify-net-from-degree-phenomena-1: 0/0 new triple (1241, 0:00:00.010192)
-- DEBUG - ----- classify-net-from-degree-phenomena-2: 0/0 new triple (1241, 0:00:00.038002)
-- DEBUG - ----- classify-net-from-degree-phenomena-3: 0/0 new triple (1241, 0:00:00.006364)
-- INFO - ----- propagate-individual-1: 1/1 new triple (1242, 0:00:00.006416)
-- INFO - ----- propagate-individual-2: 5/5 new triples (1247, 0:00:00.008293)
-- DEBUG - ----- reclassify-deprecated-net: 0/0 new triple (1247, 0:00:00.005420)
-- DEBUG - --- Serializing graph to SolarSystemDev01_transduction
-- DEBUG - ----- step: transduction
-- DEBUG - ----- id: SolarSystemDev01
-- DEBUG - ----- work_file: /home/lamenji/Workspace/Tetras/tenet/tests/output/SolarSystemDev01-20230217/technical-data/SolarSystemDev01-1/SolarSystemDev01_transduction.ttl
-- DEBUG - ----- base: http://SolarSystemDev01/transduction
-- INFO - ----- 408 triples extracted during transduction step
-- INFO - -- Applying extraction step: generation
-- INFO - --- *** November Transduction *** Sequence: main-generation-sequence
-- INFO - ----- compute-uri-for-owl-declaration-1: 8/8 new triples (1255, 0:00:00.030044)
-- INFO - ----- compute-uri-for-owl-declaration-2: 1/4 new triple (1256, 0:00:00.019682)
-- INFO - ----- compute-uri-for-owl-declaration-3: 1/1 new triple (1257, 0:00:00.049842)
-- DEBUG - ----- compute-uri-for-owl-declaration-4: 0/0 new triple (1257, 0:00:00.018787)
-- INFO - ----- compute-uri-for-owl-declaration-5: 6/6 new triples (1263, 0:00:00.019141)
-- INFO - ----- compute-uri-for-owl-declaration-6: 5/5 new triples (1268, 0:00:00.020967)
-- INFO - ----- generate-atom-class: 12/12 new triples (1280, 0:00:00.007831)
-- INFO - ----- classify-atom-class-1: 4/4 new triples (1284, 0:00:00.006734)
-- DEBUG - ----- classify-atom-class-2: 0/0 new triple (1284, 0:00:00.015968)
-- INFO - ----- generate-individual: 3/3 new triples (1287, 0:00:00.008033)
-- DEBUG - ----- classify-individual-1: 0/0 new triple (1287, 0:00:00.007648)
-- INFO - ----- classify-individual-2: 4/4 new triples (1291, 0:00:00.008491)
-- INFO - ----- generate-atom-property-1: 16/16 new triples (1307, 0:00:00.010658)
-- INFO - ----- generate-atom-property-12: 8/16 new triples (1315, 0:00:00.011613)
-- DEBUG - ----- generate-inverse-relation: 0/0 new triple (1315, 0:00:00.006359)
-- INFO - ----- generate-composite-class: 18/18 new triples (1333, 0:00:00.008989)
-- DEBUG - ----- add-restriction-to-class-1: 0/0 new triple (1333, 0:00:00.012511)
-- DEBUG - ----- add-restriction-to-class-2: 0/0 new triple (1333, 0:00:00.012346)
-- INFO - ----- add-restriction-to-class-3: 20/24 new triples (1353, 0:00:00.016476)
-- DEBUG - ----- add-restriction-to-class-4: 0/0 new triple (1353, 0:00:00.010946)
-- DEBUG - ----- add-restriction-to-class-5: 0/0 new triple (1353, 0:00:00.011763)
-- DEBUG - ----- add-restriction-to-class-6: 0/0 new triple (1353, 0:00:00.010090)
-- DEBUG - ----- generate-composite-property: 0/0 new triple (1353, 0:00:00.007500)
-- DEBUG - --- Serializing graph to SolarSystemDev01_generation
-- DEBUG - ----- step: generation
-- DEBUG - ----- id: SolarSystemDev01
-- DEBUG - ----- work_file: /home/lamenji/Workspace/Tetras/tenet/tests/output/SolarSystemDev01-20230217/technical-data/SolarSystemDev01-1/SolarSystemDev01_generation.ttl
-- DEBUG - ----- base: http://SolarSystemDev01/generation
-- INFO - ----- 106 triples extracted during generation step
-- INFO - -- Result: file containing only the factoids
-- DEBUG - --- Making factoid graph with the last step result
-- DEBUG - ----- Number of factoids: 121
-- DEBUG - ----- Graph base: http://SolarSystemDev01/factoid
-- DEBUG - --- Serializing graph to factoid file (/home/lamenji/Workspace/Tetras/tenet/tests/output/SolarSystemDev01-20230217/technical-data/SolarSystemDev01-1/SolarSystemDev01_factoid.ttl)
-- INFO -
- === Final Ontology Generation ===
-- INFO - -- Making complete factoid graph by merging the result factoids
-- INFO - ----- Total factoid number: 121
-- INFO - -- Serializing graph to factoid string
-- INFO - ----- Graph base: http://SolarSystemDev01/factoid
-- INFO - -- Serializing graph to factoid file
-- INFO - ----- Ontology Turtle File: /home/lamenji/Workspace/Tetras/tenet/tests/output/SolarSystemDev01-20230217/SolarSystemDev01_factoid.ttl
-- INFO -
- === Done ===
-- INFO -
- *** Execution Time ***
------ Function: create_ontology_from_amrld_dir (main)
------ Total Time: 0:00:07.492941
------ Process Time: 0:00:07.446408
- *** - ***
diff --git a/tests/test_rule.py b/tests/test_rule.py
index 461bcb7e..f9a1fd9e 100644
--- a/tests/test_rule.py
+++ b/tests/test_rule.py
@@ -8,9 +8,9 @@
#==============================================================================
import subprocess, os
-from rdflib import Graph
-from rdflib import Namespace
-from rdflib.namespace import NamespaceManager
+from rdflib import Graph, Namespace
+from rdflib.namespace import NamespaceManager, FOAF, RDF
+from rdflib import URIRef, Literal, BNode
FILE_PATH = f'{os.path.dirname(os.path.abspath(__file__))}'
INPUT_DIR_PATH = f'{FILE_PATH}/input/'
@@ -18,7 +18,9 @@ OUTPUT_DIR_PATH = f'{FILE_PATH}/output/'
TEST_GRAPH = f'{INPUT_DIR_PATH}testGraph1.ttl'
from context import tenet
-from tenet.febTransduction import phenomena_application_or as test_rule
+from tenet.scheme.amr_rule.transduction import phenomena_application_or_1 as rule_1
+from tenet.scheme.amr_rule.transduction import phenomena_application_or_2 as rule_2
+from tenet.scheme import amr_rule as rule
from tenet.febTransduction import query_builder
from tenet.febTransduction import prefix_handle
@@ -54,7 +56,7 @@ def define_clause_list(composition_pattern_list):
def devtest_select_pattern_application_1(graph):
print('\n -- Select Pattern Application 1')
- query_code = test_rule.__select_pattern_1()
+ query_code = rule_1.__select_pattern_1()
print(query_code)
pattern_result_set = graph.query(query_code)
print(f'\n ----- number of selection found: {len(pattern_result_set)}')
@@ -68,7 +70,7 @@ def devtest_select_pattern_application_1(graph):
def devtest_select_pattern_application_2(graph):
print('\n -- Select Pattern Application 2')
- query_code = test_rule.__select_pattern_2()
+ query_code = rule_2.__select_pattern_2()
print(query_code)
pattern_result_set = graph.query(query_code)
print(f'\n ----- number of selection found: {len(pattern_result_set)}')
@@ -89,6 +91,14 @@ def devtest_insert_query(graph):
print(test_query)
graph.update(test_query)
print(f"----- Graph Updated ({len(graph)})")
+
+
+def devtest_add_triple(graph, triple):
+ print(f'\n -- Adding triple in a graph')
+ print(f"----- Graph length before update: {len(graph)}")
+ print(f"----- Triple added: {triple}")
+ graph.add(triple)
+ print(f"----- Graph length after update: {len(graph)}")
@@ -100,9 +110,10 @@ def unittest_run_rule(graph, rule):
print('\n -- Rule Test')
rule_label, new_triple_list = rule(graph)
print(f' ----- label: {rule_label}')
- print(f' ----- new_triple_list: {len(new_triple_list)}')
+ print(f' ----- new_triple_list ({len(new_triple_list)}):')
for new_triple in new_triple_list:
- print(f' | {new_triple}')
+ (s, p, o) = new_triple
+ print(f' | {s}, {p}, {o}')
@@ -114,17 +125,21 @@ if __name__ == '__main__':
print('\n *** Test Preparation ***')
graph = load_test_graph()
+ uriref = URIRef('net:compositeClass_orbit_hasManner_conjunction-OR')
+ type_uriref = URIRef('net:Composite_Class_Net')
+ triple = (uriref, RDF.type, type_uriref)
print('\n \n')
print('\n *** Development Test ***')
devtest_select_pattern_application_1(graph)
devtest_select_pattern_application_2(graph)
devtest_insert_query(graph)
+ devtest_add_triple(graph, triple)
print('\n \n')
print('\n *** Unit Test ***')
- unittest_run_rule(graph, test_rule.analyze_phenomena_or_1)
- unittest_run_rule(graph, test_rule.analyze_phenomena_or_2)
+ unittest_run_rule(graph, rule.analyze_phenomena_or_1)
+ unittest_run_rule(graph, rule.analyze_phenomena_or_2)
print('\n \n')
print('\n *** - ***')
\ No newline at end of file
diff --git a/tests/test_naming_computer.py b/tests/test_transduction_naming_computer.py
similarity index 100%
rename from tests/test_naming_computer.py
rename to tests/test_transduction_naming_computer.py
diff --git a/tests/test_transduction_uriref_computer.py b/tests/test_transduction_rdfterm_computer.py
similarity index 97%
rename from tests/test_transduction_uriref_computer.py
rename to tests/test_transduction_rdfterm_computer.py
index f376b1ee..1a063ea7 100644
--- a/tests/test_transduction_uriref_computer.py
+++ b/tests/test_transduction_rdfterm_computer.py
@@ -21,7 +21,7 @@ TEST_GRAPH = f'{INPUT_DIR_PATH}testGraph1.ttl'
from context import tenet
import utility
-from tenet.febTransduction import uriref_computer
+from tenet.febTransduction import rdfterm_computer
@@ -89,7 +89,7 @@ def devtest_create_uriref(graph, uri):
def unittest_produce_uriref(graph, uri):
print(f'\n -- Produce valid URI Reference')
try:
- uriref = uriref_computer.produce_uriref(graph, uri)
+ uriref = rdfterm_computer.produce_uriref(graph, uri)
if uriref is None:
print(f' ----- None')
else: # uriref is not None
@@ -113,7 +113,7 @@ def unittest_produce_uriref(graph, uri):
def unittest_failure_produce_uriref(graph, uri):
print(f'\n -- * Failure to produce URI Reference *')
try:
- uriref = uriref_computer.produce_uriref(graph, uri)
+ uriref = rdfterm_computer.produce_uriref(graph, uri)
print(f'Houston, we have a problem: production is successful')
except:
print(f' ----- OK FAILURE!')
diff --git a/tests/test_semantic_net_1.py b/tests/test_transduction_semantic_net_1.py
similarity index 100%
rename from tests/test_semantic_net_1.py
rename to tests/test_transduction_semantic_net_1.py
diff --git a/tests/test_semantic_net_2.py b/tests/test_transduction_semantic_net_2.py
similarity index 100%
rename from tests/test_semantic_net_2.py
rename to tests/test_transduction_semantic_net_2.py
diff --git a/tests/test_semantic_net_3.py b/tests/test_transduction_semantic_net_3.py
similarity index 100%
rename from tests/test_semantic_net_3.py
rename to tests/test_transduction_semantic_net_3.py
diff --git a/tests/test_semantic_net_4.py b/tests/test_transduction_semantic_net_4.py
similarity index 100%
rename from tests/test_semantic_net_4.py
rename to tests/test_transduction_semantic_net_4.py
--
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